covid 19 image classification covid 19 image classification

Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. One of these datasets has both clinical and image data. Epub 2022 Mar 3. 4 and Table4 list these results for all algorithms. where CF is the parameter that controls the step size of movement for the predator. & Cmert, Z. MathSciNet Then, applying the FO-MPA to select the relevant features from the images. Inceptions layer details and layer parameters of are given in Table1. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 770778 (2016). Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Table2 shows some samples from two datasets. In Medical Imaging 2020: Computer-Aided Diagnosis, vol. Article It noted that all produced feature vectors by CNNs used in this paper are at least bigger by more than 300 times compared to that produced by FO-MPA in terms of the size of the featureset. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. It also contributes to minimizing resource consumption which consequently, reduces the processing time. Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. wrote the intro, related works and prepare results. The memory terms of the prey are updated at the end of each iteration based on first in first out concept. \delta U_{i}(t)+ \frac{1}{2! org (2015). Imaging 29, 106119 (2009). Chowdhury, M.E. etal. The focus of this study is to evaluate and examine a set of deep learning transfer learning techniques applied to chest radiograph images for the classification of COVID-19, normal (healthy), and pneumonia. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. arXiv preprint arXiv:1409.1556 (2014). Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a Wish you all a very happy new year ! In the meantime, to ensure continued support, we are displaying the site without styles MRFGRO: a hybrid meta-heuristic feature selection method for screening COVID-19 using deep features, Detection and analysis of COVID-19 in medical images using deep learning techniques, Cov-caldas: A new COVID-19 chest X-Ray dataset from state of Caldas-Colombia, Deep learning in veterinary medicine, an approach based on CNN to detect pulmonary abnormalities from lateral thoracic radiographs in cats, COVID-Net: a tailored deep convolutional neural network design for detection of COVID-19 cases from chest X-ray images, ANFIS-Net for automatic detection of COVID-19, A multi-scale gated multi-head attention depthwise separable CNN model for recognizing COVID-19, Validating deep learning inference during chest X-ray classification for COVID-19 screening, Densely attention mechanism based network for COVID-19 detection in chest X-rays, https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/, https://github.com/ieee8023/covid-chestxray-dataset, https://stanfordmlgroup.github.io/projects/chexnet, https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia, https://www.sirm.org/en/category/articles/covid-19-database/, https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing, https://doi.org/10.1016/j.irbm.2019.10.006, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, https://doi.org/10.1016/j.engappai.2020.103662, https://www.sirm.org/category/senza-categoria/covid-19/, https://doi.org/10.1016/j.future.2020.03.055, http://creativecommons.org/licenses/by/4.0/, Skin cancer detection using ensemble of machine learning and deep learning techniques, Plastic pollution induced by the COVID-19: Environmental challenges and outlook, An Inclusive Survey on Marine Predators Algorithm: Variants andApplications, A Multi-strategy Improved Outpost and Differential Evolution Mutation Marine Predators Algorithm for Global Optimization, A light-weight convolutional Neural Network Architecture for classification of COVID-19 chest X-Ray images. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. Afzali et al.15 proposed an FS method based on principal component analysis and contour-based shape descriptors to detect Tuberculosis from lung X-Ray Images. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. Inspired by our recent work38, where VGG-19 besides statistically enhanced Salp Swarm Algorithm was applied to select the best features for White Blood Cell Leukaemia classification. Deep Learning Based Image Classification of Lungs Radiography for Detecting COVID-19 using a Deep CNN and ResNet 50 Finally, the sum of the features importance value on each tree is calculated then divided by the total number of trees as in Eq. Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . It is obvious that such a combination between deep features and a feature selection algorithm can be efficient in several image classification tasks. Wu, Y.-H. etal. & Pouladian, M. Feature selection for contour-based tuberculosis detection from chest x-ray images. is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. Litjens, G. et al. Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). Med. COVID-19 image classification using deep learning: Advances, challenges and opportunities COVID-19 image classification using deep learning: Advances, challenges and opportunities Comput Biol Med. Besides, all algorithms showed the same statistical stability in STD measure, except for HHO and HGSO. HGSO was ranked second with 146 and 87 selected features from Dataset 1 and Dataset 2, respectively. Biomed. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. Also, some image transformations were applied, such as rotation, horizontal flip, and scaling. Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. PubMed According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. Provided by the Springer Nature SharedIt content-sharing initiative, Environmental Science and Pollution Research (2023), Archives of Computational Methods in Engineering (2023), Arabian Journal for Science and Engineering (2023). Going deeper with convolutions. By achieving 98.7%, 98.2% and 99.6%, 99% of classification accuracy and F-Score for dataset 1 and dataset 2, respectively, the proposed approach outperforms several CNNs and all recent works on COVID-19 images. The Shearlet transform FS method showed better performances compared to several FS methods. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Cite this article. Multimedia Tools Appl. https://doi.org/10.1038/s41598-020-71294-2, DOI: https://doi.org/10.1038/s41598-020-71294-2. Some people say that the virus of COVID-19 is. Figure5, shows that FO-MPA shows an efficient and faster convergence than the other optimization algorithms on both datasets. 43, 302 (2019). Extensive evaluation experiments had been carried out with a collection of two public X-ray images datasets. Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. 1. Simonyan, K. & Zisserman, A. Image Classification With ResNet50 Convolution Neural Network (CNN) on Covid-19 Radiography | by Emmanuella Anggi | The Startup | Medium 500 Apologies, but something went wrong on our end.. \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} Improving the ranking quality of medical image retrieval using a genetic feature selection method. AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 The test accuracy obtained for the model was 98%. Eng. J. Med. It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. The largest features were selected by SMA and SGA, respectively. There are three main parameters for pooling, Filter size, Stride, and Max pool. Methods Med. In this work, we have used four transfer learning models, VGG16, InceptionV3, ResNet50, and DenseNet121 for the classification tasks. IEEE Signal Process. For general case based on the FC definition, the Eq. Inception architecture is described in Fig. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. 121, 103792 (2020). Scientific Reports (Sci Rep) J. A.A.E. Automated detection of alzheimers disease using brain mri imagesa study with various feature extraction techniques. Test the proposed Inception Fractional-order Marine Predators Algorithm (IFM) approach on two publicity available datasets contain a number of positive negative chest X-ray scan images of COVID-19. The convergence behaviour of FO-MPA was evaluated over 25 independent runs and compared to other algorithms, where the x-axis and the y-axis represent the iterations and the fitness value, respectively. The predator tries to catch the prey while the prey exploits the locations of its food. Springer Science and Business Media LLC Online. It is calculated between each feature for all classes, as in Eq. Such methods might play a significant role as a computer-aided tool for image-based clinical diagnosis soon. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. https://keras.io (2015). While no feature selection was applied to select best features or to reduce model complexity. 79, 18839 (2020). Taking into consideration the current spread of COVID-19, we believe that these techniques can be applied as a computer-aided tool for diagnosing this virus. Comput. Zhu, H., He, H., Xu, J., Fang, Q. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. HIGHLIGHTS who: Qinghua Xie and colleagues from the Te Afliated Changsha Central Hospital, Hengyang Medical School, University of South China, Changsha, Hunan, China have published the Article: Automatic Segmentation and Classification for Antinuclear Antibody Images Based on Deep Learning, in the Journal: Computational Intelligence and Neuroscience of 14/08/2022 what: Terefore, the authors . }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! Eng. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. Moreover, the Weibull distribution employed to modify the exploration function. Sci. Image Underst. chest X-ray images into three classes of COVID-19, normal chest X-ray and other lung diseases. Our dataset consisting of 60 chest CT images of COVID-19 and non-COVID-19 patients was pre-processed and segmented using a hybrid watershed and fuzzy c-means algorithm. A. et al. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. In Smart Intelligent Computing and Applications, 305313 (Springer, 2019). Performance analysis of neural networks for classification of medical images with wavelets as a feature extractor. Health Inf. 43, 635 (2020). More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. According to the best measure, the FO-MPA performed similarly to the HHO algorithm, followed by SMA, HGSO, and SCA, respectively. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. Med. The symbol \(r\in [0,1]\) represents a random number. Scientific Reports Volume 10, Issue 1, Pages - Publisher. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. Future Gener. In Proceedings of the IEEE Conference on computer vision and pattern recognition workshops, 806813 (2014). ISSN 2045-2322 (online). Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). 40, 2339 (2020). COVID-19 tests are currently hard to come by there are simply not enough of them and they cannot be manufactured fast enough, which is causing panic. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. A.T.S. Robertas Damasevicius. COVID-19 image classification using deep features and fractional-order marine predators algorithm. Ge, X.-Y. where \(R\in [0,1]\) is a random vector drawn from a uniform distribution and \(P=0.5\) is a constant number. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and . Li, S., Chen, H., Wang, M., Heidari, A. Therefore, several pre-trained models have won many international image classification competitions such as VGGNet24, Resnet25, Nasnet26, Mobilenet27, Inception28 and Xception29. Refresh the page, check Medium 's site status, or find something interesting. (2) calculated two child nodes. 7, most works are pre-prints for two main reasons; COVID-19 is the most recent and trend topic; also, there are no sufficient datasets that can be used for reliable results. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. Li et al.34 proposed a self-adaptive bat algorithm (BA) to address two problems in lung X-ray images, rebalancing, and feature selection. & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation. Duan, H. et al. Expert Syst. First: prey motion based on FC the motion of the prey of Eq. Although the performance of the MPA and bGWO was slightly similar, the performance of SGA and WOA were the worst in both max and min measures. Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. Huang, P. et al. & Cao, J. Also, As seen in Fig. In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. Donahue, J. et al. So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. layers is to extract features from input images. Eng. Intell. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. Whereas, the slowest and the insufficient convergences were reported by both SGA and WOA in Dataset 1 and by SGA in Dataset 2. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. Eur. EMRes-50 model . Book Nguyen, L.D., Lin, D., Lin, Z. In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. In 2018 IEEE International Symposium on Circuits and Systems (ISCAS), 15 (IEEE, 2018). The family of coronaviruses is considered serious pathogens for people because they infect respiratory, hepatic, gastrointestinal, and neurologic diseases. Faramarzi, A., Heidarinejad, M., Mirjalili, S. & Gandomi, A. H. Marine predators algorithm: a nature-inspired metaheuristic. Bukhari, S. U.K., Bukhari, S. S.K., Syed, A. For the special case of \(\delta = 1\), the definition of Eq. This means we can use pre-trained model weights, leveraging all of the time and data it took for training the convolutional part, and just remove the FCN layer. medRxiv (2020). As seen in Fig. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. CNNs are more appropriate for large datasets. (22) can be written as follows: By using the discrete form of GL definition of Eq. They applied the SVM classifier with and without RDFS. Table3 shows the numerical results of the feature selection phase for both datasets. One of the main disadvantages of our approach is that its built basically within two different environments. }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. Cauchemez, S. et al. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Deep-learning artificial intelligent (AI) methods have the potential to help improve diagnostic efficiency and accuracy for reading portable CXRs. Automatic COVID-19 lung images classification system based on convolution neural network. This study presents an investigation on 16 pretrained CNNs for classification of COVID-19 using a large public database of CT scans collected from COVID-19 patients and non-COVID-19 subjects. Comput. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. Finally, the predator follows the levy flight distribution to exploit its prey location. Besides, the used statistical operations improve the performance of the FO-MPA algorithm because it supports the algorithm in selecting only the most important and relevant features. Google Scholar. To obtain In this paper, different Conv. Med. & Mirjalili, S. Slime mould algorithm: A new method for stochastic optimization. However, the proposed IMF approach achieved the best results among the compared algorithms in least time. Inf. Evaluation outcomes showed that GA based FS methods outperformed traditional approaches, such as filter based FS and traditional wrapper methods. The COVID-19 pandemic has been having a severe and catastrophic effect on humankind and is being considered the most crucial health calamity of the century. We build the first Classification model using VGG16 Transfer leaning framework and second model using Deep Learning Technique Convolutional Neural Network CNN to classify and diagnose the disease and we able to achieve the best accuracy in both the model. \(Fit_i\) denotes a fitness function value. Faramarzi et al.37 divided the agents for two halves and formulated Eqs. CAS Also, because COVID-19 is a virus, distinguish COVID-19 from common viral . 2. It based on using a deep convolutional neural network (Inception) for extracting features from COVID-19 images, then filtering the resulting features using Marine Predators Algorithm (MPA), enhanced by fractional-order calculus(FO). In general, MPA is a meta-heuristic technique that simulates the behavior of the prey and predator in nature37. A. kharrat and Mahmoud32proposed an FS method based on a hybrid of Simulated Annealing (SA) and GA to classify brain tumors using MRI. Li, J. et al. Chong, D. Y. et al. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. Whereas the worst one was SMA algorithm. By submitting a comment you agree to abide by our Terms and Community Guidelines. Eurosurveillance 18, 20503 (2013). Classification of COVID19 using Chest X-ray Images in Keras 4.6 33 ratings Share Offered By In this Guided Project, you will: Learn to Build and Train the Convolutional Neural Network using Keras with Tensorflow as Backend Learn to Visualize Data in Matplotlib Learn to make use of the Trained Model to Predict on a New Set of Data 2 hours arXiv preprint arXiv:2004.05717 (2020). Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. and M.A.A.A. (3), the importance of each feature is then calculated. The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. Mirjalili, S. & Lewis, A. Very deep convolutional networks for large-scale image recognition.